Skip to content

Issues: sanger-tol/variantcalling

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort

Issues list

Variant density feature Requests for new features user-request Requests made by users and public
#82 opened Jun 10, 2024 by muffato
Define test datasets for population genomics test For pipeline testing
#81 opened Jun 10, 2024 by muffato
Assess Popgen48/scalepopgen question Further information is requested
#80 opened Jun 10, 2024 by muffato
Assess nf-core/sarek question Further information is requested
#79 opened Jun 10, 2024 by muffato
Compress the .pi output feature Requests for new features good first issue Good for newcomers
#75 opened Apr 3, 2024 by muffato
Index VCF file feature Requests for new features good first issue Good for newcomers
#71 opened Feb 15, 2024 by gq1
Population genomics feature Requests for new features user-request Requests made by users and public
#65 opened Dec 11, 2023 by muffato
Runs of Homozygosity feature Requests for new features user-request Requests made by users and public
#64 opened Dec 11, 2023 by muffato
Patch samtools/sort to add reference input maintain Tasks to keep pipelines up to date
#61 opened Nov 6, 2023 by gq1
Calculate allele frequency feature Requests for new features user-request Requests made by users and public
#49 opened Jul 21, 2023 by priyanka-surana
Structural variation feature Requests for new features question Further information is requested user-request Requests made by users and public
#47 opened Jun 27, 2023 by priyanka-surana
Variant calling with short read data feature Requests for new features question Further information is requested user-request Requests made by users and public
#46 opened Jun 27, 2023 by priyanka-surana
Heterozygous sites across genome feature Requests for new features user-request Requests made by users and public
#42 opened Jun 27, 2023 by priyanka-surana
Calculate InDel size distribution feature Requests for new features user-request Requests made by users and public
#41 opened Jun 27, 2023 by priyanka-surana
Create flag for homozygous alternatives feature Requests for new features user-request Requests made by users and public
#40 opened Jun 27, 2023 by priyanka-surana
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.